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bioperl

Installs the BioPerl bioinformatics perl library.
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4.0 quality score

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Support the Puppet Community by contributing to this module

You are welcome to contribute to this module by suggesting new features, currency updates, or fixes. Every contribution is valuable to help ensure that the module remains compatible with the latest Puppet versions and continues to meet community needs. Complete the following steps:

  1. Review the module’s contribution guidelines and any licenses. Ensure that your planned contribution aligns with the author’s standards and any legal requirements.
  2. Fork the repository on GitHub, make changes on a branch of your fork, and submit a pull request. The pull request must clearly document your proposed change.

For questions about updating the module, contact the module’s author.

Version information

  • 0.1.0 (latest)
released Dec 26th 2016
This version is compatible with:

Start using this module

  • r10k or Code Manager
  • Bolt
  • Manual installation
  • Direct download

Add this module to your Puppetfile:

mod 'biotools-bioperl', '0.1.0'
Learn more about managing modules with a Puppetfile

Add this module to your Bolt project:

bolt module add biotools-bioperl
Learn more about using this module with an existing project

Manually install this module globally with Puppet module tool:

puppet module install biotools-bioperl --version 0.1.0

Direct download is not typically how you would use a Puppet module to manage your infrastructure, but you may want to download the module in order to inspect the code.

Download
Tags: perl, bioinformatics, bioperl

Documentation

biotools/bioperl — version 0.1.0 Dec 26th 2016

bioperl

Table of Contents

  1. Description
  2. Usage - Configuration options and additional functionality
  3. Reference - An under-the-hood peek at what the module is doing and how
  4. Limitations - OS compatibility, etc.
  5. Development - Guide for contributing to the module

Description

This module installs the BioPerl bionformatics perl library.

Usage

Default Options

By default, the library will be installed in /usr/share/lib, and version 1.6.6 will be installed. To load this module with default options:

class { 'bioperl': }

Custom parameters

You can also specify the installation directory, and the version of BioPerl:

class { 'bioperl':
           
    target_dir => '/usr/share/lib',
    
    version => '1.6.6'

}

Limitations

Currently it is only compatible with Ubuntu.